Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 AL603832.2-201ENST00000566195 2125 ntBASIC18.97■□□□□ 0.63
SEMA3EO15041 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SEMA3EO15041 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.97■□□□□ 0.63
SEMA3EO15041 AC234783.1-201ENST00000441761 496 ntBASIC18.97■□□□□ 0.63
SEMA3EO15041 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3EO15041 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SEMA3EO15041 PTP4A1P2-201ENST00000546033 454 ntBASIC18.97■□□□□ 0.63
SEMA3EO15041 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.97■□□□□ 0.63
SEMA3EO15041 AP001063.1-201ENST00000568332 529 ntBASIC18.97■□□□□ 0.63
SEMA3EO15041 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3EO15041 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3EO15041 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.97■□□□□ 0.63
SEMA3EO15041 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
SEMA3EO15041 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA3EO15041 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 AC018665.1-201ENST00000622927 1362 ntBASIC18.96■□□□□ 0.63
SEMA3EO15041 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA3EO15041 AC005229.1-201ENST00000392885 409 ntBASIC18.96■□□□□ 0.63
SEMA3EO15041 MIR1909-201ENST00000411312 80 ntBASIC18.96■□□□□ 0.63
SEMA3EO15041 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 AC068587.3-201ENST00000526613 355 ntBASIC18.96■□□□□ 0.63
SEMA3EO15041 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.96■□□□□ 0.63
SEMA3EO15041 AC005252.2-201ENST00000624630 1141 ntBASIC18.96■□□□□ 0.63
SEMA3EO15041 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA3EO15041 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA3EO15041 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA3EO15041 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.95■□□□□ 0.62
SEMA3EO15041 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.95■□□□□ 0.62
SEMA3EO15041 ACKR1-201ENST00000368121 1240 ntBASIC18.95■□□□□ 0.62
SEMA3EO15041 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SEMA3EO15041 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.95■□□□□ 0.62
SEMA3EO15041 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SEMA3EO15041 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.95■□□□□ 0.62
SEMA3EO15041 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.95■□□□□ 0.62
SEMA3EO15041 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.95■□□□□ 0.62
SEMA3EO15041 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.95■□□□□ 0.62
SEMA3EO15041 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.95■□□□□ 0.62
SEMA3EO15041 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SEMA3EO15041 AC107373.2-201ENST00000607735 490 ntBASIC18.95■□□□□ 0.62
SEMA3EO15041 AL022328.1-201ENST00000610050 478 ntBASIC18.95■□□□□ 0.62
SEMA3EO15041 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA3EO15041 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.95■□□□□ 0.62
SEMA3EO15041 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms