Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 SUN1-204ENST00000403868 978 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 CHMP1AP1-201ENST00000445563 662 ntBASIC26.52■■□□□ 1.84
CUX2O14529 TUBB8P8-201ENST00000458717 1058 ntBASIC26.52■■□□□ 1.84
CUX2O14529 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 AL160314.3-201ENST00000556041 767 ntBASIC26.52■■□□□ 1.84
CUX2O14529 STUB1-204ENST00000564370 875 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CUX2O14529 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC26.52■■□□□ 1.84
CUX2O14529 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC26.51■■□□□ 1.84
CUX2O14529 AL133373.2-201ENST00000623187 2828 ntBASIC26.51■■□□□ 1.83
CUX2O14529 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CUX2O14529 AP000356.3-201ENST00000382243 753 ntBASIC26.51■■□□□ 1.83
CUX2O14529 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CUX2O14529 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CUX2O14529 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC26.51■■□□□ 1.83
CUX2O14529 AC024293.1-201ENST00000467930 498 ntBASIC26.51■■□□□ 1.83
CUX2O14529 MIR5196-201ENST00000578146 115 ntBASIC26.51■■□□□ 1.83
CUX2O14529 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC26.51■■□□□ 1.83
CUX2O14529 MIR6816-201ENST00000620368 66 ntBASIC26.51■■□□□ 1.83
CUX2O14529 AC005915.1-201ENST00000624912 2018 ntBASIC26.51■■□□□ 1.83
CUX2O14529 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CUX2O14529 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CUX2O14529 AL592424.1-201ENST00000563624 1536 ntBASIC26.51■■□□□ 1.83
CUX2O14529 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CUX2O14529 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CUX2O14529 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC26.5■■□□□ 1.83
CUX2O14529 TMCO5B-205ENST00000530020 894 ntBASIC26.5■■□□□ 1.83
CUX2O14529 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC26.5■■□□□ 1.83
CUX2O14529 RN7SL163P-201ENST00000583100 276 ntBASIC26.5■■□□□ 1.83
CUX2O14529 ENPP7P14-201ENST00000621765 1040 ntBASIC26.5■■□□□ 1.83
CUX2O14529 AC009053.2-201ENST00000563701 2365 ntBASIC26.5■■□□□ 1.83
CUX2O14529 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC26.5■■□□□ 1.83
CUX2O14529 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CUX2O14529 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC26.5■■□□□ 1.83
CUX2O14529 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC26.5■■□□□ 1.83
CUX2O14529 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 AC004899.1-201ENST00000424687 1714 ntBASIC26.5■■□□□ 1.83
CUX2O14529 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CUX2O14529 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CUX2O14529 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC26.49■■□□□ 1.83
CUX2O14529 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CUX2O14529 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 KLF2P2-201ENST00000416807 1039 ntBASIC26.49■■□□□ 1.83
CUX2O14529 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC26.49■■□□□ 1.83
CUX2O14529 AC011247.3-201ENST00000603297 438 ntBASIC26.49■■□□□ 1.83
CUX2O14529 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC26.49■■□□□ 1.83
CUX2O14529 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CUX2O14529 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC26.49■■□□□ 1.83
CUX2O14529 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
CUX2O14529 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC26.49■■□□□ 1.83
CUX2O14529 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC26.49■■□□□ 1.83
CUX2O14529 AC005632.3-201ENST00000605544 308 ntBASIC26.49■■□□□ 1.83
CUX2O14529 AMT-204ENST00000427987 1646 ntTSL 5 BASIC26.48■■□□□ 1.83
CUX2O14529 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CUX2O14529 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 AC078925.2-201ENST00000624013 1973 ntBASIC26.48■■□□□ 1.83
CUX2O14529 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CUX2O14529 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC26.48■■□□□ 1.83
CUX2O14529 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CUX2O14529 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CUX2O14529 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms