Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 MIR600HG-201ENST00000449175 5984 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
AP3B1O00203 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.07■□□□□ 0.16
AP3B1O00203 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.07■□□□□ 0.16
AP3B1O00203 KRT18P32-201ENST00000424695 1287 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 ALG1L5P-201ENST00000482043 771 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
AP3B1O00203 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.07■□□□□ 0.16
AP3B1O00203 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.07■□□□□ 0.16
AP3B1O00203 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.07■□□□□ 0.16
AP3B1O00203 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 AL513210.1-201ENST00000629608 234 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 AL035456.1-201ENST00000456064 1369 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
AP3B1O00203 C8orf49-201ENST00000525043 1968 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 AC136621.1-201ENST00000624017 2304 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 PPT1-215ENST00000641471 2368 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 AC073347.1-201ENST00000421633 2643 ntBASIC16.07■□□□□ 0.16
AP3B1O00203 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
AP3B1O00203 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.07■□□□□ 0.16
AP3B1O00203 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3B1O00203 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP3B1O00203 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.06■□□□□ 0.16
AP3B1O00203 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.06■□□□□ 0.16
AP3B1O00203 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3B1O00203 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3B1O00203 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.06■□□□□ 0.16
AP3B1O00203 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.06■□□□□ 0.16
AP3B1O00203 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
AP3B1O00203 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3B1O00203 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.06■□□□□ 0.16
AP3B1O00203 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
AP3B1O00203 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP3B1O00203 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.06■□□□□ 0.16
AP3B1O00203 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3B1O00203 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3B1O00203 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.05■□□□□ 0.16
AP3B1O00203 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3B1O00203 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms