Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 AL603832.2-201ENST00000566195 2125 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
DDX39AO00148 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
DDX39AO00148 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
DDX39AO00148 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 AC005034.1-201ENST00000426657 489 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX39AO00148 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 MEIS3P1-201ENST00000495167 958 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX39AO00148 AC055876.2-201ENST00000531834 546 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.84■□□□□ 0.45
DDX39AO00148 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 TP53TG3HP-202ENST00000569755 579 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
DDX39AO00148 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX39AO00148 AC012645.4-201ENST00000610691 1061 ntBASIC17.84■□□□□ 0.45
DDX39AO00148 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DDX39AO00148 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
DDX39AO00148 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX39AO00148 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.83■□□□□ 0.45
DDX39AO00148 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.83■□□□□ 0.45
DDX39AO00148 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.83■□□□□ 0.45
DDX39AO00148 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.83■□□□□ 0.45
DDX39AO00148 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX39AO00148 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.83■□□□□ 0.45
DDX39AO00148 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 DGCR5-201ENST00000399539 862 ntBASIC17.83■□□□□ 0.44
DDX39AO00148 RPL13P2-201ENST00000440687 659 ntBASIC17.83■□□□□ 0.44
DDX39AO00148 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.83■□□□□ 0.44
DDX39AO00148 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DDX39AO00148 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 AC027307.3-201ENST00000594262 1100 ntBASIC17.83■□□□□ 0.44
DDX39AO00148 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 AC097359.3-201ENST00000603982 1210 ntBASIC17.83■□□□□ 0.44
DDX39AO00148 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DDX39AO00148 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX39AO00148 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX39AO00148 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX39AO00148 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 DOC2GP-204ENST00000639052 2548 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 AC011477.6-201ENST00000604980 1927 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 PCDHA1-201ENST00000378133 2726 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms