Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 RBM8B-201ENST00000555532 525 ntBASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC090164.2-201ENST00000611487 516 ntBASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC242376.2-201ENST00000619355 883 ntBASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 AC134407.2-201ENST00000625089 1978 ntBASIC18.1■□□□□ 0.49
TMEM88BA6NKF7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AC012362.1-201ENST00000434906 739 ntBASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AP003171.2-201ENST00000528208 925 ntBASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AP003392.6-201ENST00000607709 325 ntBASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 NAP1L6-202ENST00000641404 1222 ntBASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM88BA6NKF7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 AC007787.1-201ENST00000588095 1583 ntBASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms