Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 AC126177.1-201ENST00000547829 2218 ntBASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 AC104640.1-201ENST00000562617 2109 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 AC015922.1-201ENST00000421102 1152 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 AL133215.2-201ENST00000609242 977 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 CYP4F24P-201ENST00000586049 1580 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 PPT1-215ENST00000641471 2368 ntBASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPDC1A2A3K4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AC013268.4-201ENST00000637413 2228 ntBASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 REXO1L1P-202ENST00000608646 1974 ntBASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AL079307.3-201ENST00000556114 283 ntBASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms