Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL390955.2-201ENST00000603032 514 ntBASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC018529.1-201ENST00000613063 361 ntBASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AP3S2-216ENST00000617003 1561 ntBASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 U82695.1-201ENST00000635752 1889 ntBASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.83□□□□□ -0.35
TCRBV4S1A1TA0A5B7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC073389.1-201ENST00000595595 795 ntBASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.83□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms