Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 MIR1909-201ENST00000411312 80 ntBASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TOMM22P5-201ENST00000416399 439 ntBASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 BOLA2P3-201ENST00000404566 256 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AC022210.1-201ENST00000449856 793 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AL512343.1-201ENST00000605837 169 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AL158212.4-201ENST00000624062 1286 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 AC006449.5-201ENST00000610658 2098 ntBASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1G3Q9Y6M4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 MIR658-201ENST00000385210 100 ntBASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AL162726.2-201ENST00000438986 1017 ntBASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 RPS2P32-201ENST00000439199 892 ntBASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AC234783.1-201ENST00000441761 496 ntBASIC15.52■□□□□ 0.08
CSNK1G3Q9Y6M4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms