Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AC005332.1-201ENST00000577698 1310 ntBASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MROH4P-201ENST00000431302 1578 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 PTENP1-202ENST00000532280 3996 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AC245100.5-201ENST00000452108 331 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AC104819.1-201ENST00000504587 486 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AC139887.3-201ENST00000568585 713 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AL591684.3-201ENST00000605187 298 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AC004706.3-202ENST00000621574 984 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 KRT8P44-201ENST00000441609 1350 ntBASIC13.07□□□□□ -0.32
RCL1Q9Y2P8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 CICP14-201ENST00000629111 2732 ntBASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 AC106795.1-205ENST00000512851 1056 ntBASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.06□□□□□ -0.32
RCL1Q9Y2P8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms