Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AC093214.1-201ENST00000511688 1107 ntBASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 RN7SL828P-201ENST00000607615 303 ntBASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AL390754.1-201ENST00000619088 582 ntBASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.67□□□□□ -0.06
RPH3AQ9Y2J0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AL035456.1-201ENST00000456064 1369 ntBASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AC027369.6-201ENST00000525520 931 ntBASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 BANF1P1-201ENST00000553684 263 ntBASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 AL589739.1-201ENST00000607720 493 ntBASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPH3AQ9Y2J0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.65□□□□□ -0.06
RPH3AQ9Y2J0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms