Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC079316.1-201ENST00000548397 411 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AL157392.4-201ENST00000609756 345 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 KRT8P49-201ENST00000604166 1432 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AL162726.2-201ENST00000438986 1017 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC114501.1-201ENST00000445949 172 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 MTND1P31-201ENST00000449206 961 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AP000812.2-201ENST00000538934 718 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 LINC00895-201ENST00000629028 1637 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 AC008741.2-201ENST00000612792 3115 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 KRT8P22-201ENST00000562317 1415 ntBASIC15.16■□□□□ 0.02
LHX6Q9UPM6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LHX6Q9UPM6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AL138688.1-201ENST00000624851 1594 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms