Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC134312.5-201ENST00000568031 1313 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AL645937.2-201ENST00000396808 931 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 RPL5P21-201ENST00000404620 815 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 NUS1P3-201ENST00000423502 862 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPO2Q9UMS6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPO2Q9UMS6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 RPS2P32-201ENST00000439199 892 ntBASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 CROCCP4-201ENST00000457096 498 ntBASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 AC133552.6-201ENST00000613406 534 ntBASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 AC018695.7-201ENST00000624587 2492 ntBASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 PDIA3P1-201ENST00000471856 1510 ntBASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPO2Q9UMS6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms