Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 LINC02199-201ENST00000506655 2702 ntBASIC18.51■□□□□ 0.55
EFCC1Q9HA90 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EFCC1Q9HA90 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AL442647.2-201ENST00000429864 857 ntBASIC18.5■□□□□ 0.55
EFCC1Q9HA90 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AP000812.2-201ENST00000538934 718 ntBASIC18.5■□□□□ 0.55
EFCC1Q9HA90 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 AC106872.11-201ENST00000605838 421 ntBASIC18.5■□□□□ 0.55
EFCC1Q9HA90 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCC1Q9HA90 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 SLC25A24P2-201ENST00000415059 510 ntBASIC18.49■□□□□ 0.55
EFCC1Q9HA90 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AC091271.1-201ENST00000611877 1162 ntBASIC18.49■□□□□ 0.55
EFCC1Q9HA90 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 CYP4F24P-201ENST00000586049 1580 ntBASIC18.49■□□□□ 0.55
EFCC1Q9HA90 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 PCGF3-213ENST00000620529 1899 ntBASIC18.49■□□□□ 0.55
EFCC1Q9HA90 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCC1Q9HA90 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms