Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AL031284.1-201ENST00000419297 478 ntBASIC15.28■□□□□ 0.04
PIF1Q9H611 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AL513480.1-201ENST00000451731 511 ntBASIC15.28■□□□□ 0.04
PIF1Q9H611 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.28■□□□□ 0.04
PIF1Q9H611 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC005593.1-201ENST00000624894 515 ntBASIC15.28■□□□□ 0.04
PIF1Q9H611 FAM215A-202ENST00000632077 792 ntBASIC15.28■□□□□ 0.04
PIF1Q9H611 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.28■□□□□ 0.04
PIF1Q9H611 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.28■□□□□ 0.04
PIF1Q9H611 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.28■□□□□ 0.04
PIF1Q9H611 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PIF1Q9H611 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PIF1Q9H611 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.27■□□□□ 0.04
PIF1Q9H611 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 TCAF2P1-201ENST00000291129 2421 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PIF1Q9H611 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIF1Q9H611 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.27■□□□□ 0.04
PIF1Q9H611 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PIF1Q9H611 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
PIF1Q9H611 HNRNPDP1-201ENST00000439535 754 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 AC093724.1-201ENST00000448659 1027 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.27■□□□□ 0.04
PIF1Q9H611 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PIF1Q9H611 AP001005.1-201ENST00000571755 1248 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.27■□□□□ 0.04
PIF1Q9H611 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PIF1Q9H611 SLC25A6P4-201ENST00000586535 553 ntBASIC15.27■□□□□ 0.04
PIF1Q9H611 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PIF1Q9H611 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.27■□□□□ 0.04
PIF1Q9H611 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.27■□□□□ 0.04
PIF1Q9H611 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 AC105250.1-201ENST00000509378 2057 ntBASIC15.27■□□□□ 0.03
PIF1Q9H611 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PIF1Q9H611 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PIF1Q9H611 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 AC009090.5-201ENST00000624886 2285 ntBASIC15.27■□□□□ 0.03
PIF1Q9H611 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PIF1Q9H611 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.27■□□□□ 0.03
PIF1Q9H611 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 AC134407.2-201ENST00000625089 1978 ntBASIC15.26■□□□□ 0.03
PIF1Q9H611 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIF1Q9H611 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIF1Q9H611 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PIF1Q9H611 CXCL1P1-201ENST00000502804 216 ntBASIC15.26■□□□□ 0.03
PIF1Q9H611 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.26■□□□□ 0.03
PIF1Q9H611 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms