Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD9AQ99638 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD9AQ99638 AL133267.1-201ENST00000398220 340 ntBASIC16.82■□□□□ 0.28
RAD9AQ99638 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAD9AQ99638 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.82■□□□□ 0.28
RAD9AQ99638 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.82■□□□□ 0.28
RAD9AQ99638 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 AC016629.1-201ENST00000596579 586 ntBASIC16.82■□□□□ 0.28
RAD9AQ99638 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.82■□□□□ 0.28
RAD9AQ99638 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAD9AQ99638 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD9AQ99638 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAD9AQ99638 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RAD9AQ99638 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAD9AQ99638 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD9AQ99638 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.81■□□□□ 0.28
RAD9AQ99638 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD9AQ99638 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD9AQ99638 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD9AQ99638 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAD9AQ99638 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAD9AQ99638 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD9AQ99638 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAD9AQ99638 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD9AQ99638 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD9AQ99638 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD9AQ99638 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 GAPDHP40-201ENST00000505218 1006 ntBASIC16.8■□□□□ 0.28
RAD9AQ99638 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.8■□□□□ 0.28
RAD9AQ99638 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.8■□□□□ 0.28
RAD9AQ99638 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
RAD9AQ99638 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD9AQ99638 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAD9AQ99638 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD9AQ99638 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
RAD9AQ99638 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAD9AQ99638 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD9AQ99638 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms