Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TOMM22P5-201ENST00000416399 439 ntBASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AP002414.2-201ENST00000591780 3365 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AP001527.2-201ENST00000614441 631 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 DRD5P1-201ENST00000456605 1438 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AC074338.1-201ENST00000416825 156 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AC093433.1-201ENST00000458048 571 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 PRSS30P-206ENST00000641773 873 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 TUBBP5-203ENST00000508529 1334 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AL139008.1-201ENST00000437894 228 ntBASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD1Q96PZ7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD1Q96PZ7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms