Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM43Q96BQ3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 AC078925.2-201ENST00000624013 1973 ntBASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 EEF1DP6-201ENST00000449232 372 ntBASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 RN7SL11P-201ENST00000471305 293 ntBASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 AC018470.1-201ENST00000624790 3129 ntBASIC17.01■□□□□ 0.31
TRIM43Q96BQ3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC018635.2-201ENST00000608625 364 ntBASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRIM43Q96BQ3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM43Q96BQ3 AC148477.4-201ENST00000613430 1793 ntBASIC17■□□□□ 0.31
TRIM43Q96BQ3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 Z97180.1-201ENST00000445173 988 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC114812.1-204ENST00000449669 728 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC008267.1-201ENST00000474858 1069 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.99■□□□□ 0.31
TRIM43Q96BQ3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms