Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.42■□□□□ 0.7
RPGRQ92834 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.42■□□□□ 0.7
RPGRQ92834 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRQ92834 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRQ92834 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 AL133267.1-201ENST00000398220 340 ntBASIC19.41■□□□□ 0.7
RPGRQ92834 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.41■□□□□ 0.7
RPGRQ92834 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 FAM197Y7-201ENST00000432892 766 ntBASIC19.41■□□□□ 0.7
RPGRQ92834 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 KRT8P13-201ENST00000463294 1010 ntBASIC19.41■□□□□ 0.7
RPGRQ92834 AC138951.2-201ENST00000623455 1161 ntBASIC19.41■□□□□ 0.7
RPGRQ92834 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RPGRQ92834 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.41■□□□□ 0.7
RPGRQ92834 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPGRQ92834 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRQ92834 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.4■□□□□ 0.7
RPGRQ92834 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
RPGRQ92834 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.4■□□□□ 0.7
RPGRQ92834 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.4■□□□□ 0.7
RPGRQ92834 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.4■□□□□ 0.7
RPGRQ92834 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.4■□□□□ 0.7
RPGRQ92834 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 AP005019.2-201ENST00000615104 511 ntBASIC19.4■□□□□ 0.7
RPGRQ92834 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RPGRQ92834 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPGRQ92834 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RPGRQ92834 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRQ92834 AC106886.4-201ENST00000623557 2502 ntBASIC19.4■□□□□ 0.7
RPGRQ92834 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
RPGRQ92834 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPGRQ92834 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 AC006001.1-201ENST00000325130 474 ntBASIC19.39■□□□□ 0.69
RPGRQ92834 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 Z93015.1-201ENST00000451718 390 ntBASIC19.39■□□□□ 0.69
RPGRQ92834 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 AC078819.1-201ENST00000547454 765 ntBASIC19.39■□□□□ 0.69
RPGRQ92834 AC012085.1-201ENST00000548270 765 ntBASIC19.39■□□□□ 0.69
RPGRQ92834 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.39■□□□□ 0.69
RPGRQ92834 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.39■□□□□ 0.69
RPGRQ92834 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 AL022328.3-201ENST00000607943 679 ntBASIC19.39■□□□□ 0.69
RPGRQ92834 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.39■□□□□ 0.69
RPGRQ92834 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPGRQ92834 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.39■□□□□ 0.69
RPGRQ92834 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRQ92834 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPGRQ92834 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms