Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNED1Q8TER0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.02■□□□□ 0.63
SNED1Q8TER0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNED1Q8TER0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNED1Q8TER0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNED1Q8TER0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNED1Q8TER0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SNED1Q8TER0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNED1Q8TER0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SNED1Q8TER0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 IMP3P2-201ENST00000489760 475 ntBASIC19.01■□□□□ 0.63
SNED1Q8TER0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 MIR4706-201ENST00000582134 82 ntBASIC19.01■□□□□ 0.63
SNED1Q8TER0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNED1Q8TER0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.01■□□□□ 0.63
SNED1Q8TER0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
SNED1Q8TER0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 NUS1P3-201ENST00000423502 862 ntBASIC19■□□□□ 0.63
SNED1Q8TER0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19■□□□□ 0.63
SNED1Q8TER0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19■□□□□ 0.63
SNED1Q8TER0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 PRSS30P-206ENST00000641773 873 ntBASIC19■□□□□ 0.63
SNED1Q8TER0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19■□□□□ 0.63
SNED1Q8TER0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19■□□□□ 0.63
SNED1Q8TER0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19■□□□□ 0.63
SNED1Q8TER0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 BX539320.1-201ENST00000623759 877 ntBASIC19■□□□□ 0.63
SNED1Q8TER0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19■□□□□ 0.63
SNED1Q8TER0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNED1Q8TER0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNED1Q8TER0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SNED1Q8TER0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNED1Q8TER0 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.99■□□□□ 0.63
SNED1Q8TER0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms