Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PCDHA3-202ENST00000532566 4594 ntBASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MRPL20P1-201ENST00000400819 433 ntBASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 KRT18P31-201ENST00000506277 1292 ntBASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 FLJ16779-201ENST00000612722 7638 ntBASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NANOGP1Q8N7R0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AC073439.1-201ENST00000624121 1774 ntBASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 AC126755.1-201ENST00000525846 6405 ntBASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NANOGP1Q8N7R0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NANOGP1Q8N7R0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NANOGP1Q8N7R0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms