Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC27A1Q6PCB7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC27A1Q6PCB7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AL133267.1-201ENST00000398220 340 ntBASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AC134915.1-201ENST00000426461 574 ntBASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AL162726.2-201ENST00000438986 1017 ntBASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 INTS4P2-202ENST00000614726 2019 ntBASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC27A1Q6PCB7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC27A1Q6PCB7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 KRT8P22-201ENST00000562317 1415 ntBASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 AC244107.1-201ENST00000442033 332 ntBASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 AL359711.2-201ENST00000563105 872 ntBASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC27A1Q6PCB7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 GPR53P-205ENST00000457298 1084 ntBASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC27A1Q6PCB7 AC010319.3-201ENST00000597028 470 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms