Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC098859.1-201ENST00000502915 1238 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AC105233.2-201ENST00000523697 349 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AF228730.5-201ENST00000530288 346 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AC106730.1-201ENST00000566722 1090 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 MIR940-201ENST00000401276 94 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 AL135744.1-201ENST00000565098 629 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 AC024267.1-201ENST00000582320 895 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 SPTSSB-204ENST00000617024 1292 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 FAM197Y3-203ENST00000618346 717 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 AC091812.2-201ENST00000619081 385 ntBASIC16.28■□□□□ 0.2
CASC4Q6P4E1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CASC4Q6P4E1 SBF1P1-201ENST00000444527 5631 ntBASIC16.27■□□□□ 0.2
CASC4Q6P4E1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AC023274.1-201ENST00000418278 595 ntBASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AL671277.1-201ENST00000429656 993 ntBASIC16.27■□□□□ 0.2
CASC4Q6P4E1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms