Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC096734.2-201ENST00000562054 433 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC064836.3-201ENST00000607928 673 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC027601.4-201ENST00000611259 610 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 CICP17-201ENST00000418553 2377 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 AC012569.1-201ENST00000591191 1524 ntBASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 MED15P5-201ENST00000423150 992 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PMS2P1-201ENST00000431037 1228 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 AC007967.2-201ENST00000432613 625 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 SLC25A1P1-201ENST00000528351 927 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 MIR4515-201ENST00000584082 81 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 AL139011.1-202ENST00000642063 584 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 OR2I1P-210ENST00000642037 4691 ntBASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM53Q6P2H8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms