Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AC127383.1-201ENST00000444697 1800 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AC100757.3-201ENST00000622361 1406 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PPT1-215ENST00000641471 2368 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AL390955.2-201ENST00000603032 514 ntBASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AC073347.1-201ENST00000421633 2643 ntBASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN20Q4JDL3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 TSSK5P-201ENST00000423978 907 ntBASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 PMS2P2-201ENST00000425039 1128 ntBASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 RN7SL618P-201ENST00000477850 296 ntBASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms