Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR4321-201ENST00000592276 80 ntBASIC17.9■□□□□ 0.46
TPM4P67936 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM4P67936 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TPM4P67936 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM4P67936 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TPM4P67936 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.89■□□□□ 0.46
TPM4P67936 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TPM4P67936 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.89■□□□□ 0.46
TPM4P67936 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.89■□□□□ 0.46
TPM4P67936 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TPM4P67936 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TPM4P67936 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 LINC01101-201ENST00000622953 1884 ntBASIC17.89■□□□□ 0.45
TPM4P67936 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 AC108073.2-201ENST00000464002 357 ntBASIC17.89■□□□□ 0.45
TPM4P67936 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 AC008735.5-201ENST00000623544 497 ntBASIC17.89■□□□□ 0.45
TPM4P67936 AC004790.2-201ENST00000623588 572 ntBASIC17.89■□□□□ 0.45
TPM4P67936 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TPM4P67936 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 AC092127.1-201ENST00000567093 3455 ntBASIC17.89■□□□□ 0.45
TPM4P67936 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TPM4P67936 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TPM4P67936 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM4P67936 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TPM4P67936 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM4P67936 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM4P67936 AC105339.3-201ENST00000560043 636 ntBASIC17.88■□□□□ 0.45
TPM4P67936 PRELID1P1-202ENST00000567272 903 ntBASIC17.88■□□□□ 0.45
TPM4P67936 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM4P67936 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.88■□□□□ 0.45
TPM4P67936 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TPM4P67936 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TPM4P67936 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM4P67936 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM4P67936 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms