Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 DUSP5P1-201ENST00000441325 1139 ntBASIC14.6□□□□□ -0.07
CDC42P60953 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CDC42P60953 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC42P60953 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC42P60953 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 AC126365.1-201ENST00000578585 1514 ntBASIC14.6□□□□□ -0.07
CDC42P60953 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CDC42P60953 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC42P60953 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42P60953 MROH4P-201ENST00000431302 1578 ntBASIC14.6□□□□□ -0.07
CDC42P60953 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC42P60953 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 AC138969.2-201ENST00000532739 9932 ntBASIC14.59□□□□□ -0.07
CDC42P60953 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 MRPL20P1-201ENST00000400819 433 ntBASIC14.59□□□□□ -0.07
CDC42P60953 HMGA1P7-201ENST00000406908 502 ntBASIC14.59□□□□□ -0.07
CDC42P60953 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 KRT18P27-201ENST00000427733 1299 ntBASIC14.59□□□□□ -0.07
CDC42P60953 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 IGHV3-65-201ENST00000523210 341 ntBASIC14.59□□□□□ -0.07
CDC42P60953 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 MIR4321-201ENST00000592276 80 ntBASIC14.59□□□□□ -0.07
CDC42P60953 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 AC134407.2-201ENST00000625089 1978 ntBASIC14.59□□□□□ -0.07
CDC42P60953 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms