Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PER3P56645 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 HLA-H-201ENST00000383620 1096 ntBASIC14.8□□□□□ -0.04
PER3P56645 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.8□□□□□ -0.04
PER3P56645 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.8□□□□□ -0.04
PER3P56645 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.8□□□□□ -0.04
PER3P56645 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.8□□□□□ -0.04
PER3P56645 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 MIR4492-201ENST00000581627 80 ntBASIC14.8□□□□□ -0.04
PER3P56645 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PER3P56645 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 AL391825.1-201ENST00000457671 1364 ntBASIC14.8□□□□□ -0.04
PER3P56645 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PER3P56645 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 AC092171.3-201ENST00000610122 2651 ntBASIC14.79□□□□□ -0.04
PER3P56645 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PER3P56645 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PER3P56645 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 U91328.1-201ENST00000437528 223 ntBASIC14.79□□□□□ -0.04
PER3P56645 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.79□□□□□ -0.04
PER3P56645 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PER3P56645 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 AC087499.5-201ENST00000452760 1342 ntBASIC14.79□□□□□ -0.04
PER3P56645 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 AP002490.2-201ENST00000524791 560 ntBASIC14.79□□□□□ -0.04
PER3P56645 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PER3P56645 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PER3P56645 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.79□□□□□ -0.04
PER3P56645 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 MIR6805-201ENST00000615055 62 ntBASIC14.79□□□□□ -0.04
PER3P56645 AP3S2-216ENST00000617003 1561 ntBASIC14.79□□□□□ -0.04
PER3P56645 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.79□□□□□ -0.04
PER3P56645 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PER3P56645 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PER3P56645 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms