Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC1A1P43005 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC1A1P43005 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC1A1P43005 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A1P43005 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC1A1P43005 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A1P43005 AC009090.5-201ENST00000624886 2285 ntBASIC16.65■□□□□ 0.26
SLC1A1P43005 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC1A1P43005 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC1A1P43005 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 MIR574-201ENST00000385209 96 ntBASIC16.65■□□□□ 0.26
SLC1A1P43005 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A1P43005 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SLC1A1P43005 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A1P43005 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC1A1P43005 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A1P43005 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A1P43005 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A1P43005 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SLC1A1P43005 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
SLC1A1P43005 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC1A1P43005 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC1A1P43005 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC1A1P43005 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SLC1A1P43005 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC1A1P43005 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC1A1P43005 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC1A1P43005 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A1P43005 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A1P43005 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC1A1P43005 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC1A1P43005 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A1P43005 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A1P43005 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A1P43005 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC1A1P43005 HNRNPUP1-201ENST00000554987 333 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms