Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 MIR6069-201ENST00000620069 79 ntBASIC18.21■□□□□ 0.51
KRT2P35908 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.21■□□□□ 0.5
KRT2P35908 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
KRT2P35908 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT2P35908 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 AL033527.5-202ENST00000641632 1098 ntBASIC18.2■□□□□ 0.5
KRT2P35908 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.2■□□□□ 0.5
KRT2P35908 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT2P35908 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT2P35908 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
KRT2P35908 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT2P35908 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 AC105250.1-201ENST00000509378 2057 ntBASIC18.19■□□□□ 0.5
KRT2P35908 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT2P35908 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT2P35908 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 TREML5P-201ENST00000421694 576 ntBASIC18.19■□□□□ 0.5
KRT2P35908 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT2P35908 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 AC027369.6-201ENST00000525520 931 ntBASIC18.19■□□□□ 0.5
KRT2P35908 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.19■□□□□ 0.5
KRT2P35908 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KRT2P35908 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
KRT2P35908 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT2P35908 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT2P35908 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT2P35908 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
KRT2P35908 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT2P35908 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT2P35908 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT2P35908 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT2P35908 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRT2P35908 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT2P35908 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT2P35908 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT2P35908 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KRT2P35908 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms