Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-FP30511 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-FP30511 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-FP30511 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-FP30511 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-FP30511 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.06■□□□□ 0.16
HLA-FP30511 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 AC024909.3-201ENST00000611513 2257 ntBASIC16.06■□□□□ 0.16
HLA-FP30511 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 AL603832.2-201ENST00000566195 2125 ntBASIC16.06■□□□□ 0.16
HLA-FP30511 AC112504.1-201ENST00000623415 1841 ntBASIC16.06■□□□□ 0.16
HLA-FP30511 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.06■□□□□ 0.16
HLA-FP30511 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-FP30511 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 RPSAP52-203ENST00000622976 1023 ntBASIC16.06■□□□□ 0.16
HLA-FP30511 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-FP30511 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-FP30511 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
HLA-FP30511 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-FP30511 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 AC007389.4-201ENST00000454674 793 ntBASIC16.05■□□□□ 0.16
HLA-FP30511 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-FP30511 KRT18P43-201ENST00000469825 1281 ntBASIC16.05■□□□□ 0.16
HLA-FP30511 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 AL359711.2-201ENST00000563105 872 ntBASIC16.05■□□□□ 0.16
HLA-FP30511 AC000095.1-201ENST00000603208 874 ntBASIC16.05■□□□□ 0.16
HLA-FP30511 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 AL162274.1-201ENST00000617191 1098 ntBASIC16.05■□□□□ 0.16
HLA-FP30511 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-FP30511 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-FP30511 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HLA-FP30511 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-FP30511 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-FP30511 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HLA-FP30511 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HLA-FP30511 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-FP30511 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-FP30511 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HLA-FP30511 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-FP30511 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-FP30511 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-FP30511 ARSEP1-201ENST00000420443 635 ntBASIC16.04■□□□□ 0.16
HLA-FP30511 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-FP30511 GPR53P-205ENST00000457298 1084 ntBASIC16.04■□□□□ 0.16
HLA-FP30511 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-FP30511 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-FP30511 HILS1-202ENST00000545329 423 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms