Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBL1P28749 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBL1P28749 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RBL1P28749 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBL1P28749 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBL1P28749 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.32■□□□□ 0.2
RBL1P28749 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RBL1P28749 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RBL1P28749 UPF3AP3-201ENST00000420996 769 ntBASIC16.32■□□□□ 0.2
RBL1P28749 RBPMS2P1-201ENST00000437762 623 ntBASIC16.32■□□□□ 0.2
RBL1P28749 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.32■□□□□ 0.2
RBL1P28749 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.32■□□□□ 0.2
RBL1P28749 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.32■□□□□ 0.2
RBL1P28749 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.32■□□□□ 0.2
RBL1P28749 AC105021.1-202ENST00000570572 669 ntBASIC16.32■□□□□ 0.2
RBL1P28749 AC018529.1-201ENST00000613063 361 ntBASIC16.32■□□□□ 0.2
RBL1P28749 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.32■□□□□ 0.2
RBL1P28749 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RBL1P28749 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.32■□□□□ 0.2
RBL1P28749 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBL1P28749 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
RBL1P28749 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.31■□□□□ 0.2
RBL1P28749 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.31■□□□□ 0.2
RBL1P28749 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 AC138035.3-201ENST00000622706 2791 ntBASIC16.31■□□□□ 0.2
RBL1P28749 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.31■□□□□ 0.2
RBL1P28749 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 AP000344.2-201ENST00000512987 629 ntBASIC16.31■□□□□ 0.2
RBL1P28749 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.31■□□□□ 0.2
RBL1P28749 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.31■□□□□ 0.2
RBL1P28749 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.31■□□□□ 0.2
RBL1P28749 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
RBL1P28749 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 AL109954.1-202ENST00000564051 2148 ntBASIC16.31■□□□□ 0.2
RBL1P28749 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.31■□□□□ 0.2
RBL1P28749 AC127383.1-201ENST00000444697 1800 ntBASIC16.31■□□□□ 0.2
RBL1P28749 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBL1P28749 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBL1P28749 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBL1P28749 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.3■□□□□ 0.2
RBL1P28749 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.3■□□□□ 0.2
RBL1P28749 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBL1P28749 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.3■□□□□ 0.2
RBL1P28749 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms