Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 MRPS18AP1-201ENST00000414458 589 ntBASIC16.06■□□□□ 0.16
XPAP23025 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.06■□□□□ 0.16
XPAP23025 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 AC009407.1-201ENST00000568958 598 ntBASIC16.06■□□□□ 0.16
XPAP23025 AC138761.1-201ENST00000584393 385 ntBASIC16.06■□□□□ 0.16
XPAP23025 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 AC008738.7-201ENST00000609744 511 ntBASIC16.06■□□□□ 0.16
XPAP23025 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
XPAP23025 AL109936.8-201ENST00000641772 604 ntBASIC16.06■□□□□ 0.16
XPAP23025 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
XPAP23025 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.06■□□□□ 0.16
XPAP23025 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
XPAP23025 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
XPAP23025 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
XPAP23025 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
XPAP23025 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 SERBP1P5-201ENST00000510079 1181 ntBASIC16.05■□□□□ 0.16
XPAP23025 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 AC006449.5-201ENST00000610658 2098 ntBASIC16.05■□□□□ 0.16
XPAP23025 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
XPAP23025 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.05■□□□□ 0.16
XPAP23025 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
XPAP23025 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
XPAP23025 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
XPAP23025 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
XPAP23025 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.04■□□□□ 0.16
XPAP23025 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
XPAP23025 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
XPAP23025 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.04■□□□□ 0.16
XPAP23025 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
XPAP23025 PCDHA3-202ENST00000532566 4594 ntBASIC16.04■□□□□ 0.16
XPAP23025 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
XPAP23025 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
XPAP23025 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.04■□□□□ 0.16
XPAP23025 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.04■□□□□ 0.16
XPAP23025 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms