Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CGB3P0DN86 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.02□□□□□ -0.33
CGB3P0DN86 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.02□□□□□ -0.33
CGB3P0DN86 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.02□□□□□ -0.33
CGB3P0DN86 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.02□□□□□ -0.33
CGB3P0DN86 AC025048.3-201ENST00000590609 569 ntBASIC13.02□□□□□ -0.33
CGB3P0DN86 TEX28P1-201ENST00000613479 1221 ntBASIC13.02□□□□□ -0.33
CGB3P0DN86 AL138828.2-201ENST00000615812 383 ntBASIC13.02□□□□□ -0.33
CGB3P0DN86 TEX28P2-201ENST00000617764 1221 ntBASIC13.02□□□□□ -0.33
CGB3P0DN86 AC005702.4-201ENST00000618393 416 ntBASIC13.02□□□□□ -0.33
CGB3P0DN86 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
CGB3P0DN86 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CGB3P0DN86 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CGB3P0DN86 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.02□□□□□ -0.33
CGB3P0DN86 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CGB3P0DN86 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.01□□□□□ -0.33
CGB3P0DN86 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 SERBP1P3-201ENST00000459980 809 ntBASIC13.01□□□□□ -0.33
CGB3P0DN86 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.01□□□□□ -0.33
CGB3P0DN86 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 AC140878.1-201ENST00000565277 250 ntBASIC13.01□□□□□ -0.33
CGB3P0DN86 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.01□□□□□ -0.33
CGB3P0DN86 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 SPDYE12P-201ENST00000618416 771 ntBASIC13.01□□□□□ -0.33
CGB3P0DN86 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.01□□□□□ -0.33
CGB3P0DN86 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.01□□□□□ -0.33
CGB3P0DN86 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.01□□□□□ -0.33
CGB3P0DN86 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CGB3P0DN86 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms