Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SFTPBP07988 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.92□□□□□ -0.18
SFTPBP07988 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.92□□□□□ -0.18
SFTPBP07988 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.92□□□□□ -0.18
SFTPBP07988 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.92□□□□□ -0.18
SFTPBP07988 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 AC069224.1-201ENST00000566372 1715 ntBASIC13.92□□□□□ -0.18
SFTPBP07988 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SFTPBP07988 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.92□□□□□ -0.18
SFTPBP07988 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SFTPBP07988 AP005117.1-202ENST00000581724 1908 ntBASIC13.92□□□□□ -0.18
SFTPBP07988 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.91□□□□□ -0.18
SFTPBP07988 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.91□□□□□ -0.18
SFTPBP07988 AC074386.1-202ENST00000463561 864 ntBASIC13.91□□□□□ -0.18
SFTPBP07988 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.91□□□□□ -0.18
SFTPBP07988 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.91□□□□□ -0.18
SFTPBP07988 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.91□□□□□ -0.18
SFTPBP07988 AC005829.1-201ENST00000570002 483 ntBASIC13.91□□□□□ -0.18
SFTPBP07988 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SFTPBP07988 C20orf181-201ENST00000623918 480 ntBASIC13.91□□□□□ -0.18
SFTPBP07988 AC134684.3-201ENST00000641758 218 ntBASIC13.91□□□□□ -0.18
SFTPBP07988 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SFTPBP07988 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SFTPBP07988 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SFTPBP07988 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SFTPBP07988 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SFTPBP07988 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SFTPBP07988 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SFTPBP07988 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms