Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.35■□□□□ 0.21
TOP3BO95985 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.35■□□□□ 0.21
TOP3BO95985 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 PPT1-215ENST00000641471 2368 ntBASIC16.35■□□□□ 0.21
TOP3BO95985 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.34■□□□□ 0.21
TOP3BO95985 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TOP3BO95985 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 GIMAP3P-201ENST00000495150 836 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 TP53TG3HP-202ENST00000569755 579 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 AC005412.3-201ENST00000580309 715 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 AL645728.2-201ENST00000641974 660 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.34■□□□□ 0.21
TOP3BO95985 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TOP3BO95985 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.34■□□□□ 0.21
TOP3BO95985 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TOP3BO95985 AC138969.3-201ENST00000546612 1459 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 AC138932.2-201ENST00000548268 1459 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 AC126755.4-201ENST00000549796 1459 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.34■□□□□ 0.21
TOP3BO95985 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 AC022144.1-201ENST00000602255 1580 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 AL513477.1-201ENST00000602865 2407 ntBASIC16.34■□□□□ 0.21
TOP3BO95985 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TOP3BO95985 AC005622.1-201ENST00000636801 1703 ntBASIC16.33■□□□□ 0.21
TOP3BO95985 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.33■□□□□ 0.21
TOP3BO95985 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TOP3BO95985 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TOP3BO95985 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TOP3BO95985 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.33■□□□□ 0.21
TOP3BO95985 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TOP3BO95985 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.33■□□□□ 0.21
TOP3BO95985 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TOP3BO95985 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.33■□□□□ 0.2
TOP3BO95985 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.33■□□□□ 0.2
TOP3BO95985 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TOP3BO95985 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.33■□□□□ 0.2
TOP3BO95985 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
TOP3BO95985 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.33■□□□□ 0.2
TOP3BO95985 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.33■□□□□ 0.2
TOP3BO95985 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.33■□□□□ 0.2
TOP3BO95985 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TOP3BO95985 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.33■□□□□ 0.2
TOP3BO95985 AC129492.6-201ENST00000611383 1305 ntBASIC16.33■□□□□ 0.2
TOP3BO95985 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms