Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.35■□□□□ 0.53
CTDNEP1O95476 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CTDNEP1O95476 Z97205.2-201ENST00000564697 1639 ntBASIC18.34■□□□□ 0.53
CTDNEP1O95476 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 AC092580.3-201ENST00000430932 139 ntBASIC18.34■□□□□ 0.53
CTDNEP1O95476 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 HLA-V-204ENST00000476601 1289 ntBASIC18.34■□□□□ 0.53
CTDNEP1O95476 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 AC015911.4-201ENST00000588022 1070 ntBASIC18.34■□□□□ 0.53
CTDNEP1O95476 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.34■□□□□ 0.53
CTDNEP1O95476 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTDNEP1O95476 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CTDNEP1O95476 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.33■□□□□ 0.53
CTDNEP1O95476 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 FO538757.1-201ENST00000623083 1397 ntBASIC18.33■□□□□ 0.53
CTDNEP1O95476 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTDNEP1O95476 MST1L-201ENST00000442552 2185 ntBASIC18.33■□□□□ 0.52
CTDNEP1O95476 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 AC010336.2-201ENST00000564226 506 ntBASIC18.33■□□□□ 0.52
CTDNEP1O95476 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTDNEP1O95476 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.33■□□□□ 0.52
CTDNEP1O95476 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDNEP1O95476 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.32■□□□□ 0.52
CTDNEP1O95476 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms