Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GPC4O75487 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.04■□□□□ 0.16
GPC4O75487 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
GPC4O75487 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
GPC4O75487 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
GPC4O75487 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC4O75487 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
GPC4O75487 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 AC004461.1-201ENST00000412461 403 ntBASIC16.03■□□□□ 0.16
GPC4O75487 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.03■□□□□ 0.16
GPC4O75487 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 AC098859.1-201ENST00000502915 1238 ntBASIC16.03■□□□□ 0.16
GPC4O75487 AP000344.2-201ENST00000512987 629 ntBASIC16.03■□□□□ 0.16
GPC4O75487 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.03■□□□□ 0.16
GPC4O75487 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC4O75487 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
GPC4O75487 SPTSSB-204ENST00000617024 1292 ntBASIC16.03■□□□□ 0.16
GPC4O75487 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC4O75487 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC4O75487 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.02■□□□□ 0.16
GPC4O75487 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.02■□□□□ 0.16
GPC4O75487 AP006288.1-201ENST00000446065 395 ntBASIC16.02■□□□□ 0.16
GPC4O75487 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.02■□□□□ 0.16
GPC4O75487 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
GPC4O75487 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 IGHV3-62-201ENST00000520057 340 ntBASIC16.02■□□□□ 0.16
GPC4O75487 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.02■□□□□ 0.16
GPC4O75487 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
GPC4O75487 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC4O75487 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC4O75487 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC4O75487 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.02■□□□□ 0.15
GPC4O75487 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.02■□□□□ 0.15
GPC4O75487 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GPC4O75487 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms