Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 AC073150.1-201ENST00000450406 1084 ntBASIC6.92□□□□□ -1.3
USH2AO75445 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 AL031713.1-201ENST00000564813 661 ntBASIC6.92□□□□□ -1.3
USH2AO75445 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 AC138028.4-201ENST00000564984 1845 ntBASIC6.92□□□□□ -1.3
USH2AO75445 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 KRT8P29-201ENST00000420409 1371 ntBASIC6.92□□□□□ -1.3
USH2AO75445 VILL-207ENST00000465644 1857 ntTSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
USH2AO75445 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC6.92□□□□□ -1.3
USH2AO75445 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 IFT20-206ENST00000578122 834 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 ZACNP1-201ENST00000612259 710 ntBASIC6.92□□□□□ -1.3
USH2AO75445 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 NF2-208ENST00000403435 2568 ntTSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC6.92□□□□□ -1.3
USH2AO75445 AC132938.4-201ENST00000623835 848 ntBASIC6.92□□□□□ -1.3
USH2AO75445 AC025262.2-201ENST00000623975 1056 ntBASIC6.92□□□□□ -1.3
USH2AO75445 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 AL157791.1-201ENST00000553667 1699 ntBASIC6.92□□□□□ -1.3
USH2AO75445 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
USH2AO75445 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 AC004987.2-201ENST00000395959 1148 ntBASIC6.91□□□□□ -1.3
USH2AO75445 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 AC018463.1-201ENST00000456674 917 ntBASIC6.91□□□□□ -1.3
USH2AO75445 RN7SL67P-201ENST00000492147 296 ntBASIC6.91□□□□□ -1.3
USH2AO75445 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 PEBP1P2-201ENST00000603980 558 ntBASIC6.91□□□□□ -1.3
USH2AO75445 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 HNRNPA1P41-201ENST00000397777 928 ntBASIC6.91□□□□□ -1.3
USH2AO75445 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 SNORD3B-2-202ENST00000571722 791 ntBASIC6.91□□□□□ -1.3
USH2AO75445 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC6.91□□□□□ -1.3
USH2AO75445 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 USP4-203ENST00000415188 1454 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
USH2AO75445 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC6.91□□□□□ -1.3
USH2AO75445 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USH2AO75445 HNRNPA1P58-201ENST00000403629 610 ntBASIC6.91□□□□□ -1.3
USH2AO75445 THY1-209ENST00000580275 578 ntTSL 3 BASIC6.91□□□□□ -1.3
USH2AO75445 AL157813.1-201ENST00000612996 587 ntBASIC6.91□□□□□ -1.3
USH2AO75445 AL691432.1-201ENST00000596308 1422 ntBASIC6.91□□□□□ -1.3
USH2AO75445 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms