Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.26□□□□□ -0.13
ZIC3O60481 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
ZIC3O60481 RARRES2P5-201ENST00000564013 466 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.26□□□□□ -0.13
ZIC3O60481 SPDYE22P-201ENST00000582158 798 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 CHCHD2P3-201ENST00000603038 451 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 AL391069.4-201ENST00000609583 481 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 AL662799.1-202ENST00000614205 422 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 AC138969.3-201ENST00000546612 1459 ntBASIC14.25□□□□□ -0.13
ZIC3O60481 AC138932.2-201ENST00000548268 1459 ntBASIC14.25□□□□□ -0.13
ZIC3O60481 AC126755.4-201ENST00000549796 1459 ntBASIC14.25□□□□□ -0.13
ZIC3O60481 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC3O60481 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC3O60481 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC3O60481 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC3O60481 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 TP53TG3HP-202ENST00000569755 579 ntBASIC14.25□□□□□ -0.13
ZIC3O60481 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.25□□□□□ -0.13
ZIC3O60481 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.25□□□□□ -0.13
ZIC3O60481 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.25□□□□□ -0.13
ZIC3O60481 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZIC3O60481 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZIC3O60481 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.25□□□□□ -0.13
ZIC3O60481 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 PRAL-201ENST00000624952 3286 ntBASIC14.24□□□□□ -0.13
ZIC3O60481 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 AC087499.6-201ENST00000411576 835 ntBASIC14.24□□□□□ -0.13
ZIC3O60481 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.24□□□□□ -0.13
ZIC3O60481 AC055876.2-201ENST00000531834 546 ntBASIC14.24□□□□□ -0.13
ZIC3O60481 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.24□□□□□ -0.13
ZIC3O60481 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ZIC3O60481 AC099568.2-201ENST00000609194 695 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms