Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COCHO43405 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
COCHO43405 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COCHO43405 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COCHO43405 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COCHO43405 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COCHO43405 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COCHO43405 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
COCHO43405 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
COCHO43405 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COCHO43405 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COCHO43405 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.33■□□□□ 0.2
COCHO43405 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 AC007389.4-201ENST00000454674 793 ntBASIC16.33■□□□□ 0.2
COCHO43405 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.33■□□□□ 0.2
COCHO43405 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.33■□□□□ 0.2
COCHO43405 AL049840.4-201ENST00000602422 811 ntBASIC16.33■□□□□ 0.2
COCHO43405 AC000095.1-201ENST00000603208 874 ntBASIC16.33■□□□□ 0.2
COCHO43405 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 RPSAP52-203ENST00000622976 1023 ntBASIC16.33■□□□□ 0.2
COCHO43405 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COCHO43405 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.33■□□□□ 0.2
COCHO43405 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
COCHO43405 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COCHO43405 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COCHO43405 AC010491.1-201ENST00000563101 2797 ntBASIC16.32■□□□□ 0.2
COCHO43405 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.32■□□□□ 0.2
COCHO43405 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COCHO43405 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COCHO43405 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.32■□□□□ 0.2
COCHO43405 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COCHO43405 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 KRT8P22-201ENST00000562317 1415 ntBASIC16.32■□□□□ 0.2
COCHO43405 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.32■□□□□ 0.2
COCHO43405 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.32■□□□□ 0.2
COCHO43405 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.32■□□□□ 0.2
COCHO43405 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.32■□□□□ 0.2
COCHO43405 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 AL162274.1-201ENST00000617191 1098 ntBASIC16.32■□□□□ 0.2
COCHO43405 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COCHO43405 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COCHO43405 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COCHO43405 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
COCHO43405 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COCHO43405 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COCHO43405 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.31■□□□□ 0.2
COCHO43405 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COCHO43405 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COCHO43405 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COCHO43405 AC079776.1-201ENST00000401540 1152 ntBASIC16.31■□□□□ 0.2
COCHO43405 ARSEP1-201ENST00000420443 635 ntBASIC16.31■□□□□ 0.2
COCHO43405 AC134915.1-201ENST00000426461 574 ntBASIC16.31■□□□□ 0.2
COCHO43405 GPR53P-205ENST00000457298 1084 ntBASIC16.31■□□□□ 0.2
COCHO43405 VDAC1P7-201ENST00000462417 847 ntBASIC16.31■□□□□ 0.2
COCHO43405 HILS1-202ENST00000545329 423 ntBASIC16.31■□□□□ 0.2
COCHO43405 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.31■□□□□ 0.2
COCHO43405 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.31■□□□□ 0.2
COCHO43405 AC124283.3-201ENST00000570869 594 ntBASIC16.31■□□□□ 0.2
COCHO43405 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.31■□□□□ 0.2
COCHO43405 AC010319.3-201ENST00000597028 470 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms