Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HOXA2O43364 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HOXA2O43364 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXA2O43364 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HOXA2O43364 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXA2O43364 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 FLJ38576-201ENST00000623820 2459 ntBASIC16.89■□□□□ 0.29
HOXA2O43364 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HOXA2O43364 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 MIR1908-201ENST00000410394 80 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXA2O43364 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXA2O43364 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 AC106760.1-201ENST00000508690 800 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 KRT18P25-201ENST00000508931 1278 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 KRT90P-201ENST00000549264 1064 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.88■□□□□ 0.29
HOXA2O43364 AC015910.1-201ENST00000579400 975 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXA2O43364 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
HOXA2O43364 AC092171.3-201ENST00000610122 2651 ntBASIC16.88■□□□□ 0.29
HOXA2O43364 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXA2O43364 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HOXA2O43364 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXA2O43364 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXA2O43364 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 AP001582.1-201ENST00000525856 295 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 MIR4538-201ENST00000581377 78 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 AP005019.2-201ENST00000615104 511 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 MIR6869-201ENST00000619434 62 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXA2O43364 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 AC005332.8-201ENST00000622750 2735 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 AC012313.1-201ENST00000593393 3059 ntBASIC16.87■□□□□ 0.29
HOXA2O43364 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXA2O43364 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXA2O43364 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXA2O43364 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HOXA2O43364 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms