Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARVCFO00192 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.26■□□□□ 0.35
ARVCFO00192 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ARVCFO00192 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ARVCFO00192 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
ARVCFO00192 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARVCFO00192 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.26■□□□□ 0.35
ARVCFO00192 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.25■□□□□ 0.35
ARVCFO00192 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ARVCFO00192 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 AC005052.1-201ENST00000625181 2492 ntBASIC17.25■□□□□ 0.35
ARVCFO00192 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.25■□□□□ 0.35
ARVCFO00192 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 CD8B2-202ENST00000417670 633 ntBASIC17.25■□□□□ 0.35
ARVCFO00192 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.25■□□□□ 0.35
ARVCFO00192 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 SCARNA20.5-201ENST00000516991 142 ntBASIC17.25■□□□□ 0.35
ARVCFO00192 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.25■□□□□ 0.35
ARVCFO00192 EEF1DP1-201ENST00000585891 896 ntBASIC17.25■□□□□ 0.35
ARVCFO00192 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 AL138799.1-201ENST00000448213 1675 ntBASIC17.25■□□□□ 0.35
ARVCFO00192 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
ARVCFO00192 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.25■□□□□ 0.35
ARVCFO00192 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARVCFO00192 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ARVCFO00192 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ARVCFO00192 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ARVCFO00192 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ARVCFO00192 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.24■□□□□ 0.35
ARVCFO00192 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ARVCFO00192 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 FNTAP2-201ENST00000430308 634 ntBASIC17.24■□□□□ 0.35
ARVCFO00192 BX284668.4-201ENST00000453917 508 ntBASIC17.24■□□□□ 0.35
ARVCFO00192 AL590640.2-201ENST00000457038 527 ntBASIC17.24■□□□□ 0.35
ARVCFO00192 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.24■□□□□ 0.35
ARVCFO00192 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.24■□□□□ 0.35
ARVCFO00192 BX539320.1-201ENST00000623759 877 ntBASIC17.24■□□□□ 0.35
ARVCFO00192 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ARVCFO00192 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.24■□□□□ 0.35
ARVCFO00192 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ARVCFO00192 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARVCFO00192 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ARVCFO00192 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.23■□□□□ 0.35
ARVCFO00192 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
ARVCFO00192 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.23■□□□□ 0.35
ARVCFO00192 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 ME2P1-201ENST00000426028 1970 ntBASIC17.23■□□□□ 0.35
ARVCFO00192 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ARVCFO00192 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ARVCFO00192 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.23■□□□□ 0.35
ARVCFO00192 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ARVCFO00192 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.23■□□□□ 0.35
ARVCFO00192 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.23■□□□□ 0.35
ARVCFO00192 AC020914.3-201ENST00000594712 304 ntBASIC17.23■□□□□ 0.35
ARVCFO00192 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARVCFO00192 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms