Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 LINC01023-201ENST00000606054 436 ntBASIC11.7□□□□□ -0.54
SMKR1H3BMG3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.7□□□□□ -0.54
SMKR1H3BMG3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMKR1H3BMG3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC016734.2-201ENST00000624325 1377 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 INTS4P1-203ENST00000641008 3683 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC063952.2-201ENST00000498792 1227 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC107918.2-201ENST00000530817 355 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC074051.2-201ENST00000565115 352 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 FGD5P1-202ENST00000614866 2498 ntBASIC11.69□□□□□ -0.54
SMKR1H3BMG3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMKR1H3BMG3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms