Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 SPDYE17-201ENST00000412399 783 ntBASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TP53TG3HP-202ENST00000569755 579 ntBASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AL513523.2-202ENST00000427283 2040 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 GK-202ENST00000378941 458 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 MIR648-201ENST00000385046 94 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NME2P1-201ENST00000426182 414 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SDHAP3-202ENST00000515467 728 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 API5-211ENST00000534695 560 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AC140912.1-201ENST00000577171 1054 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 MIR4321-201ENST00000592276 80 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 AL109936.8-201ENST00000641772 604 ntBASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms