Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 AL009178.2-201ENST00000597278 2719 ntBASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM49D1C9J1S8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 BCAR1-209ENST00000546196 1340 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 BNIP3P1-202ENST00000550043 1585 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 AC243562.2-201ENST00000561247 970 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 MIR4313-201ENST00000580760 101 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 AL691432.1-201ENST00000596308 1422 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 AL031008.1-201ENST00000619963 541 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PCDHA3-202ENST00000532566 4594 ntBASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM49D1C9J1S8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC127383.1-201ENST00000444697 1800 ntBASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 IGHV3-22-201ENST00000520721 359 ntBASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC004877.2-201ENST00000623941 599 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms