Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ATP5G2P4-201ENST00000442175 420 ntBASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 MIR6752-201ENST00000618442 71 ntBASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHB1Q9Y5F3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 HLA-V-204ENST00000476601 1289 ntBASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 CU639417.3-201ENST00000624240 1404 ntBASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB1Q9Y5F3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 ARSEP1-201ENST00000420443 635 ntBASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AL353705.2-201ENST00000428243 662 ntBASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 U91328.1-201ENST00000437528 223 ntBASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AC009477.1-201ENST00000452936 217 ntBASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 AC008738.7-201ENST00000609744 511 ntBASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms