Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 SERBP1P3-201ENST00000459980 809 ntBASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AC135586.1-201ENST00000539323 574 ntBASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AC004233.3-201ENST00000607794 1269 ntBASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AC092850.2-201ENST00000623821 2697 ntBASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 CYP4F24P-201ENST00000586049 1580 ntBASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLIP2Q9UDT6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 AC023824.1-201ENST00000562945 2975 ntBASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP2Q9UDT6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms