Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 MIR940-201ENST00000401276 94 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 AC007967.2-201ENST00000432613 625 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 KRT18P34-201ENST00000488218 1270 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 AC109635.5-201ENST00000533593 962 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 LINC00552-201ENST00000625151 2579 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AC092474.2-201ENST00000424288 719 ntBASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AC096734.2-201ENST00000562054 433 ntBASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AL078644.1-201ENST00000609881 752 ntBASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 AC079781.4-201ENST00000641908 219 ntBASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 C18orf15-201ENST00000623680 2534 ntBASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AMBRA1Q9C0C7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 CICP4-201ENST00000447359 2812 ntBASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 AC073439.1-201ENST00000624121 1774 ntBASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AMBRA1Q9C0C7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms