Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTFDC1Q9BY42 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AC004898.1-201ENST00000451057 766 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AKR7A2P1-201ENST00000460134 915 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 RNA5SP486-201ENST00000515961 83 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AP006547.1-201ENST00000563435 692 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AC006453.4-201ENST00000636949 1252 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 AC006449.6-201ENST00000612330 2296 ntBASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTFDC1Q9BY42 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTFDC1Q9BY42 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 SLC25A24P2-201ENST00000415059 510 ntBASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 RPSAP36-202ENST00000494591 1261 ntBASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 AC244452.3-201ENST00000636814 210 ntBASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 AL138799.1-201ENST00000448213 1675 ntBASIC19.08■□□□□ 0.64
RTFDC1Q9BY42 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 KRT8P35-201ENST00000483942 1338 ntBASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTFDC1Q9BY42 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms