Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 ACA64.2-201ENST00000459014 129 ntBASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 RRP7BP-205ENST00000566851 833 ntBASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 AC074044.1-201ENST00000609673 707 ntBASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 AL109936.8-201ENST00000641772 604 ntBASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPAP1Q9BWH6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AL136982.4-201ENST00000437689 1740 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC023310.3-201ENST00000557027 670 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC100756.1-201ENST00000562736 682 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC138749.3-201ENST00000567691 622 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC132938.2-201ENST00000579188 680 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AC116165.1-201ENST00000611806 668 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AL591163.1-201ENST00000641757 987 ntBASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.23■□□□□ 0.67
RPAP1Q9BWH6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AL589987.1-201ENST00000453380 819 ntBASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 RN7SL837P-201ENST00000463010 287 ntBASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPAP1Q9BWH6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms